diff --git a/README.md b/README.md index 3f6d99c..677b539 100644 --- a/README.md +++ b/README.md @@ -137,7 +137,7 @@ | - | - | - | - | - | - | - | - | | [LiTS](https://competitions.codalab.org/competitions/17094) | 肝脏/肝脏肿瘤 | 分割 | CT | 131+70 | 0/1标签 | nii | [CC 4.0](https://competitions.codalab.org/competitions/17094#learn_the_details-terms_and_conditions) | - + LiTS数据集包含131套训练扫描和70组测试数据，其中70组测试数据标签不公开。LiTS训练集中包含3DIRCADB中的所有数据，所以如果合并多个数据集不要合并这两个。Medical Segmentation Decathlon中肝脏分割的数据集就是LiTS。 @@ -170,7 +170,7 @@ LiTS数据集包含131套训练扫描和70组测试数据，其中70组测试数 | - | - | - | - | - | - | - | - | | 3D-IRCADb [01](https://www.ircad.fr/research/3d-ircadb-01/) [02](https://www.ircad.fr/research/3d-ircadb-01/) | 肝脏/肝肿瘤 | 分割 | CT | 20+2 | surface mesh | dcm | CC | - + 3D-IRCADb是比较早的一个数据集，有两个子集，分别包含20组和2组CT片子。 @@ -186,7 +186,7 @@ LiTS数据集包含131套训练扫描和70组测试数据，其中70组测试数 CHAOS是一个多脏器，多模态分割数据集。 -![CHAOS](./static/chaos.png) +![CHAOS](https://raw.githubusercontent.com/linhandev/dataset/main/static/chaos.png) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/23864) @@ -197,7 +197,7 @@ CHAOS是一个多脏器，多模态分割数据集。 | - | - | - | - | - | - | - | - | | [TCGA-LIHC](https://wiki.cancerimagingarchive.net/display/Public/TCGA-LIHC) | 肝 | | CT/MR/PT | 97患者/237套 | 无标签 | dcm | [Other](https://wiki.cancerimagingarchive.net/display/Public/Data+Usage+Policies+and+Restrictions) | -![tcga-lihc](./static/tcga-lihc.jpg) +![tcga-lihc](https://raw.githubusercontent.com/linhandev/dataset/main/static/tcga-lihc.jpg) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/37439) @@ -207,7 +207,7 @@ CHAOS是一个多脏器，多模态分割数据集。 | - | - | - | - | - | - | - | - | | [MSD肝脏血管分割](http://medicaldecathlon.com/) | 肝脏血管 | 分割 | CT | 443 | 0/1 | nii | [CC-BY-SA 4.0](https://creativecommons.org/licenses/by-sa/4.0/) | -![hepatic-Vessels](./static/Hepatic-Vessels.png) +![hepatic-Vessels](https://raw.githubusercontent.com/linhandev/dataset/main/static/Hepatic-Vessels.png) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/10333) @@ -218,7 +218,7 @@ CHAOS是一个多脏器，多模态分割数据集。 | - | - | - | - | - | - | - | - | | [MSD肺癌分割](http://medicaldecathlon.com/) | 肺脏 | 分割 | CT | 96 | 0/1 | nii | [CC-BY-SA 4.0](https://creativecommons.org/licenses/by-sa/4.0/) | -![Lung-Tumours](./static/Lung-Tumours.png) +![Lung-Tumours](https://raw.githubusercontent.com/linhandev/dataset/main/static/Lung-Tumours.png) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/10334) @@ -261,7 +261,7 @@ LoLa11 包含55套CT数据，未发现任何公开标注信息 | - | - | - | - | - | - | - | - | | [CheXpert](https://stanfordmlgroup.github.io/competitions/chexpert/) | | | | | | | [Other](https://stanfordmlgroup.github.io/competitions/chexpert/) | -![chestxpert](./static/chest-x-pert.png) +![chestxpert](https://raw.githubusercontent.com/linhandev/dataset/main/static/chest-x-pert.png) 介绍论文： [CheXpert: A Large Chest Radiograph Dataset with Uncertainty Labels and Expert Comparison](https://arxiv.org/abs/1901.07031) @@ -273,7 +273,7 @@ LoLa11 包含55套CT数据，未发现任何公开标注信息 | - | - | - | - | - | - | - | - | | [NIHChest Xray](https://www.kaggle.com/nih-chest-xrays/data) | 14种肺部疾病/部分病灶位置 | 分类/检测 | CXR | 112,120 | csv | png | [CC0: Public Domain](https://creativecommons.org/publicdomain/zero/1.0/) | -![img](./static/nih-chest-xray.png) +![img](https://raw.githubusercontent.com/linhandev/dataset/main/static/nih-chest-xray.png) 介绍论文： [ChestX-ray8: Hospital-scale Chest X-ray Database and Benchmarks on Weakly-Supervised Classification and Localization of Common Thorax Diseases](http://openaccess.thecvf.com/content_cvpr_2017/papers/Wang_ChestX-ray8_Hospital-Scale_Chest_CVPR_2017_paper.pdf) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/35660) @@ -300,7 +300,7 @@ LoLa11 包含55套CT数据，未发现任何公开标注信息 | - | - | - | - | - | - | - | | [NSCLC-Radiomics](https://wiki.cancerimagingarchive.net/display/Public/NSCLC-Radiomics) | 非小细胞癌　| 分割　|　CT | 422 | | dcm | -![NSCLC-Radiomics](./static/NSCLC-Radiomics.png) +![NSCLC-Radiomics](https://raw.githubusercontent.com/linhandev/dataset/main/static/NSCLC-Radiomics.png) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/63958) @@ -498,7 +498,7 @@ Aistudio下载 [Part1](https://aistudio.baidu.com/aistudio/datasetdetail/63957) | - | - | - | - | - | - | - | | [Lung-PET-CT-Dx](https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=70224216) | 肺癌　| 目标检测 | CT | 363 | xml | dcm | -![Lung-PET-CT-Dx](./static/Lung-PET-CT-Dx.png) +![Lung-PET-CT-Dx](https://raw.githubusercontent.com/linhandev/dataset/main/static/Lung-PET-CT-Dx.png) ## 气胸 @@ -558,7 +558,7 @@ Aistudio下载 [Part1](https://aistudio.baidu.com/aistudio/datasetdetail/63957) | - | - | - | - | - | - | - | - | | [MSD Brain Tumor Segmentation](http://medicaldecathlon.com/) | 胶质瘤/肿瘤/水肿 | 分割 | MRI | 484 Train + 266 Test | 0/1 | nii | [CC-BY-SA 4.0](https://creativecommons.org/licenses/by-sa/4.0/) | -![msd-brain](./static/msd-brain-tumor.png) +![msd-brain](https://raw.githubusercontent.com/linhandev/dataset/main/static/msd-brain-tumor.png) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/10277) @@ -569,7 +569,7 @@ Aistudio下载 [Part1](https://aistudio.baidu.com/aistudio/datasetdetail/63957) | - | - | - | - | - | - | - | - | | [MSD Hippocampus Segmentation](http://medicaldecathlon.com/) | 海马体 | 分割 | MRI | 394 | 0/1 | nii | [CC-BY-SA 4.0](https://creativecommons.org/licenses/by-sa/4.0/) | -![msd-hippocampus](./static/msd-hippocampus.png) +![msd-hippocampus](https://raw.githubusercontent.com/linhandev/dataset/main/static/msd-hippocampus.png) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/23862) @@ -627,7 +627,7 @@ Aistudio下载 [Part1](https://aistudio.baidu.com/aistudio/datasetdetail/63957) | - | - | - | - | - | - | - | - | | [Kits19](https://kits19.grand-challenge.org/) | 肾脏/肾肿瘤 | 分割 | | | | | | -![kits19](./static/kits19.png) +![kits19](https://raw.githubusercontent.com/linhandev/dataset/main/static/kits19.png) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/24582) @@ -675,7 +675,7 @@ mmwhs是心脏分割数据集，共有8类，MRI和CT两种模态 相关项目 | - | - | - | - | - | - | - | - | | [MSD心脏分割](http://medicaldecathlon.com/) | 左心房 | 分割 | MRI | 20(训练)+10(测试) | | | [CC-BY-SA 4.0](https://creativecommons.org/licenses/by-sa/4.0/) | -![msd-Cardiac](./static/mds-cardiac.png) +![msd-Cardiac](https://raw.githubusercontent.com/linhandev/dataset/main/static/mds-cardiac.png) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/23911) @@ -727,7 +727,7 @@ FIRE 是一个视网膜眼底图像数据集，包含 129张 眼底视网膜图 | - | - | - | - | - | - | - | - | | [STARE](https://cecas.clemson.edu/~ahoover/stare/) | 眼底血管 | 分割 | 眼底照片 | 400 | 照片 | 照片 | 无 | -![stare](./static/stare.png) +![stare](https://raw.githubusercontent.com/linhandev/dataset/main/static/stare.png) STructured Analysis of the Retina数据集包含400张眼底照片，作者团队对这些数据进行了多种诊断，并对部分数据的血管进行了标注 @@ -740,7 +740,7 @@ STructured Analysis of the Retina数据集包含400张眼底照片，作者团 | - | - | - | - | - | - | - | - | | [CHASE_DB1](https://blogs.kingston.ac.uk/retinal/) | 眼底血管 | 分割 | 眼底照片 | 28 | png | png | 无 | -![CHASE_DB1](./static/CHASE_DB1.png) +![CHASE_DB1](https://raw.githubusercontent.com/linhandev/dataset/main/static/CHASE_DB1.png) Kinston大学公开的一个小规模眼底分割数据集，包含28张眼底照片及对应的分割标签。 @@ -818,7 +818,7 @@ Aistudio下载 [2D+Time Datasets](https://aistudio.baidu.com/aistudio/datasetdet | - | - | - | - | - | - | - | - | | [磁共振图像脊柱结构多类别三维自动分割](https://www.spinesegmentation-challenge.com/) | 椎骨和椎间盘 | 分割 | MRI T2WI | 172 | 0/1 | nii | [Custom](https://www.spinesegmentation-challenge.com/?page_id=34) | -![spine-mri](./static/spine-mri.png) +![spine-mri](https://raw.githubusercontent.com/linhandev/dataset/main/static/spine-mri.png) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/81211) @@ -840,7 +840,7 @@ Aistudio下载 [2D+Time Datasets](https://aistudio.baidu.com/aistudio/datasetdet | - | - | - | - | - | - | - | - | | [VerSe](https://github.com/anjany/verse) | 脊椎 | 分割 | | | | | [CC BY-SA 4.0](https://creativecommons.org/licenses/by-sa/4.0/) | - + [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/86496) @@ -860,7 +860,7 @@ Aistudio下载 [2D+Time Datasets](https://aistudio.baidu.com/aistudio/datasetdet | - | - | - | - | - | - | - | - | | [MSD前列腺分割](http://medicaldecathlon.com/) | 前列腺中央腺体及外周区域 | 分割 | 多模态核磁 | 32(训练)+16(测试) | | | [CC-BY-SA 4.0](https://creativecommons.org/licenses/by-sa/4.0/) | -![msd-prostate](./static/msd-prostate.png) +![msd-prostate](https://raw.githubusercontent.com/linhandev/dataset/main/static/msd-prostate.png) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/23912) @@ -870,7 +870,7 @@ Aistudio下载 [2D+Time Datasets](https://aistudio.baidu.com/aistudio/datasetdet | - | - | - | - | - | - | - | | [QIN-PROSTATE-Repeatability](https://wiki.cancerimagingarchive.net/display/Public/QIN-PROSTATE-Repeatability) | 前列腺癌　| | MRI | 15 |　　| dcm | -![QIN-Prostate-Repeatability](./static/QIN-Prostate-Repeatability.png) +![QIN-Prostate-Repeatability](https://raw.githubusercontent.com/linhandev/dataset/main/static/QIN-Prostate-Repeatability.png) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/63950) @@ -890,7 +890,7 @@ Aistudio下载 [2D+Time Datasets](https://aistudio.baidu.com/aistudio/datasetdet | - | - | - | - | - | - | - | | [PDMR-833975-119-R](https://wiki.cancerimagingarchive.net/display/Public/Imaging+tissue+characterization+of+a+patient+derived+xenograft+model+of+adenocarcinoma+pancreas%3A+PDMR-833975-119-R) |　胰腺癌　| |　MRI | 20 | | dcm | -![PDMR-833975-119-R](./static/PDMR-833975-119-R.png) +![PDMR-833975-119-R](https://raw.githubusercontent.com/linhandev/dataset/main/static/PDMR-833975-119-R.png) [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/64052) @@ -926,7 +926,7 @@ Aistudio下载 [2D+Time Datasets](https://aistudio.baidu.com/aistudio/datasetdet | - | - | - | - | - | - | - | - | | [SARAS-MESAD](https://saras-mesad.grand-challenge.org/) | 24种动作 | 静态背景动作识别 | 内窥镜 | 4(真实手术)+5(模拟手术) | | | [CC BY-NC-SA 4.0](https://creativecommons.org/licenses/by-nc-sa/4.0/) | -![saras-mesad](./static/saras-mesad.png) +![saras-mesad](https://raw.githubusercontent.com/linhandev/dataset/main/static/saras-mesad.png) [//]: # (TODO: [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/90922) @@ -937,7 +937,7 @@ Aistudio下载 [2D+Time Datasets](https://aistudio.baidu.com/aistudio/datasetdet | - | - | - | - | - | - | - | - | | [SARAS-ESAD](https://saras-esad.grand-challenge.org/) | 21种手术动作 | 静态背景动作识别 | 内窥镜 | 22,601(训练)+4,574(测试) | 图片 | BB | [CC BY-NC-SA](https://creativecommons.org/licenses/by-nc-sa/3.0/) | -![SARAS-ESAD](./static/SARAS-ESAD.png) +![SARAS-ESAD](https://raw.githubusercontent.com/linhandev/dataset/main/static/SARAS-ESAD.png) [//]: # (TODO: [Aistudio下载](https://aistudio.baidu.com/aistudio/datasetdetail/90922) @@ -1056,5 +1056,3 @@ Aistudio下载 [2D+Time Datasets](https://aistudio.baidu.com/aistudio/datasetdet [//]: # (TODO: 做一个tcia转nii的py程序) [//]: # (TODO: 图片一样的大小,居中) - -